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Synthetic Biology Literature MindMap (Master Node) by Mind Map: Synthetic Biology Literature
MindMap (Master Node)
5.0 stars - 1 reviews range from 0 to 5

Synthetic Biology Literature MindMap (Master Node)

Welcome to the master node of this literature mind map. This map was created as a first source to visit for anyone interested in synthetic biology.

Full article analysis by year

13 articles, whose nodes contain an image of the abstract, were chosen based on Google Scholar and PubMed search. Each article contains the phrase "synthetic biology" in the title. This node contains all the references cited in the thirteen articles and ordered by year of publication.

2010

Jarboe (2010), Dellomonaco 2010, Zhang 2010, Brennen 2010, Rodriguez-Moya 2010, Clomburg 2010, Hongbo 2010

2009

Kornmann 2009, Miller 2009, Miller 2009, Osman 2009, Wang 2009, Chin 2009, Weber 2009, French 2009, Zhang 2009, Brynildsen 2009, Trinh 2009, Durnin 2009, Taconi 2009, Turner 2009, Service 2009, Matsushika 2009, Wen 2009, Ferrer 2009, MacLean 2009, Hallenbeck 2009, Yan 2009, Rude 2009, Keseler 2009, Walker 2009, Laitigue 2009, Machielsen 2009, Spadiut 2009, Wang 2009, Cashion 2009, Durot 2009, Kjeldsen 2009, Alper 2009, Nielsen 2009, Carothers 2009, Yomano 2009, Yomano 2009, Picataggio 2009, Picataggio 2009

2008

Brenner 2008, Lee K 2008, Lee K 2008, Lee K 2008, Lee K 2008, Lee K 2008, Yomano 2008, Yomano 2008, Fortman 2008, Fortman 2008, Jantama 2008, Jantama 2008, Keasling 2008, Keasling 2008, Keasling 2008, Keasling 2008, Keasling 2008, A. O'Malley 2008, Savage 2008, Pinton 2008, Brito 2008, Kutik 2008, Borjesson 2008, Hu 2008, Medini 2008, Almeida 2008, Trinh 2008, Vroom 2008, Shetty 2008, Canton 2008, Andersen 2008, Senger 2008, Fischer 2008, Cann 2008, Gorke 2008, Yazdani 2008, Murarka 2008, Stephanopoulos 2008, Durrett 2008, Dismukes 2008, Nevoigt 2008, Shen 2008, Eiteman 2008, Kato 2008, Balagadde 2008, Kambam 2008, Soucaille 2008, Blanch 2008, Chisti 2008, Steen 2008, Inui 2008, Jiang 2008, Tran 2008, Zhang 2008, Atsumi 2008, Atsumi 2008, Atsumi 2008, Atsumi 2008, Atsumi 2008, Atsumi 2008, Mukhopadhyay 2008, Mukhopadhyay 2008, Gibson 2008, Gibson 2008, Conner 2008, Connor 2008, Prather 2008, Prather 2008

2007

Hayashi 2007, Hanai 2007, Hanai 2007, Lee K. 2007, Lee K 2007, Lee K 2007, Anderson 2007, Anderson 2007, Anderson 2007, Win 2007, Win 2007, Tang 2007, Tang 2007, Tang 2007, Sharma 2007, Sharma 2007, Brenner 2007, Brenner 2007, Marquet 2007, Marguet 2007, Christi 2007, Chisti 2007, Forster 2007, Forster 2007, Meisinger 2007, Bugl 2007, Ball 2007, Pennisi 2007, Sole 2007, Glass 2007, Voight 2007, Leonard 2007, Murphy 2007, Dueber 2007, Batt 2007, Pitera 2007, Yeh 2007, de la Cueva-Mendez 2007, Alon 2007, Arai 2007, Atsumi 2007, Somerville 2007, Ezeji 2007, Huntley 2007, Feist 2007, Chu 2007, Li 2007, Greber 2007, Chang 2007, McKinlay 2007, Suthers 2007, Leisola 2007, Liao 2007, Wisselink 2007, Bauer 2007, Zhang 2007, Jarboe 2007, Kalsheuer 2007, Roman-Leshkov 2007, Yazdani 2007, Pfleger 2007, Weber 2007, Shou 2007, Diggle 2007, Kuramitsu 2007, Doktycz 2007, Wolkenhauer 2007, Kerr 2007, van Maris 2007, Henstra 2007, Himmel 2007, Keasling 2007, Henkel 2007, Holt 2007, Rai 2007, Bugl 2007, Serrano 2007, Serrano 2007, Alper 2007, Alper 2007, Park 2007, Park 2007, Park 2007, Drubin 2007, Drubin 2007, Drubin2007, Withers 2007, Withers 2007, Withers 2007, Kim 2007, Kim 2007, Lartigue 2007, Lartigue 2007, Tyo 2007, Tyo 2007, Stephanopoulos 2007, Stephanopoulos 2007

2006

Tucker 2006, Lee K 2006, Lee K 2006, Lee K 2006, Lee K 2006, Lee K 2006, Lee K 2006, Lee K 2006, Ro 2006, Ro 2006, Ro 2006, Ro 2006, Ro 2006, Ro 2006, Andrianantoandro 2006, Andrianantoandro 2006, Andrianantoandro 2006, Adrianantoandro 2006, Pfleger 2006, Pfleger 2006, Pfleger 2006, Pfleger 2006, Anderson 2006, Anderson 2006, Anderson 2006, Forster 2006, Stahler 2006, Chang 2006, Noireaux 2006, Arkin 2006, Stone 2006, Simpson 2006, Jeppsson 2006, Kalscheuer 2006, Dharmadi 2006, Martin 2006, Fernandez-Miragall 2006, Mutka 2006, Kalscheuer 2006, Ladygina 2006, Isaacs 2006, Suel 2006, Keller 2006, Burmolle 2006, Ryan 2006, Marsh 2006, Check 2006, Di Ventura 2006, Heinemann 2006, Tucker 2006, Lindahl 2006, Giesecke 2006, Burgdorf 2006, Ihara 2006, Ragauskas 2006, Farrell 2006, Brenner 2006, Esper 2006, Schoondermark-Stolk 2006, Jefferies 2006, Sanchez 2006, Tishkov 2006, Bro 2006, West 2006, Arenas 2006, Di Ventura 2006, Arkin 2006, Voigt 2006, Maurer 2006, Posfai 2006, Glass 2006, Alper 2006, Jackson 2006, Schubert 2006, Cornish-Bowden 2006, Heinemann 2006, Breithaupt 2006, Chopra 2006, Barrett 2006, Zimmer 2006, Szabadkai 2006, Csordas 2006, Leonard 2006, Zhou 2006, Grabar 2006, Cirino 2006, Posfai 2006, Pleiss 2006, Pleiss 2006, Pleiss 2006, Newman 2006, Newman 2006, Guido 2006, Guido 2006, Luisi 2006, Luisi 2006

2005

Frost 2005, Lee K 2005, Lee K 2005, Lee K 2005, Lee K 2005, Lee K 2005, Alper 2005, Alper 2005, Benner 2005, Benner 2005, Benner 2005, Benner 2005, Chen 2005, Chen 2005, Chan 2005, Chan 2005, Chan 2005, Ball 2005, Park 2005, Komar 2005, Majdalani 2005, Deana 2005, Enserink 2005, Kuyper 2005, Kayser 2005, Ozkan 2005, Sanchez 2005, Lynd 2005, Simmen 2005, Schuldiner 2005, Gohil 2005, Yan 2005, Hatzimanikatis 2005, Kao 2005, Ray 2005, Meynial-Salles 2005, Rao 2005, Roy 2005, Anderson 2005, Balagadde 2005, Zhou 2005, Korkegian 2005, Chica 2005, Bloom 2005, Lu 2005, Fong 2005, Grotkjaer 2005, Itaya 2005, Deamer 2005, Collins 2005, Jana 2005, Fung 2005, Guntas 2005, Hooshangi 2005, Karig 2005, Keasling 2005, Pennisi 2005, Rosenfeld 2005, Weinberger 2005, Raab 2005, Paredes 2005, Sprinzak 2005, Check 2005, Bhutkar 2005, Church 2005, Isalan 2005, Tumphey 2005, Bayer 2005, Braun 2005, Booth 2005, Tester 2005, Sprinzak 2005, Parsek 2005, Kaper 2005, Kato 2005, Endy 2005, Endy 2005, Endy 2005, Endy 2005, Endy 2005, Basu 2005, Basu 2005, Clark 2005, Clark 2005, McDaniel 2005, McDaniel 2005, McDaniel 2005, Levskaya 2005, Levskaya 2005

2004

Werpy 2004, Dwyer 2004, Dwyer 2004, Dwyer 2004, You 2004, You 2004, Butler 2004, Bulter 2004, Kodumal 2004, Kodumal 2004, Kodumal 2004, Kobayashi 2004, Kobayashi 2004, Ball 2004, Ball 2004, Ball 2004, Kramer 2004, Pharkya 2004, Hoffman 2004, Kuyper 2004, Klinke 2004, Tomas 2004, Vennerstrom 2004, Mandal 2004, Kushner 2004, Lyon 2004, Sismour 2004, Santa-Lucia 2004, Jeffries 2004, Traff-Bjerre 2004, Nielsen 2004, Ricardo 2004, Meyer 2004, Mildvan 2004, Milo 2004, Ali 2004, Martinot 2004, Gibbs 2004, Shah 2004, Nicoli 2004, Kaplan 2004, Hasty 2004, Dueber 2004, Belovsky 2004, Brent 2004, Sonderegger 2004, Patil 2004, Price 2004, Almaas 2004, Dos Santos 2004, Youngman 2004, Frederick 2004, Lin 2004, Soames 2004, Gil 2004, Steidler 2004, Carr 2004, Feng 2004, Garcia-Ojalvo 2004, Guntas 2004, Basu 2004, Hermann 2004, Elbeik 2004, Elbeik 2004, Isaacs 2004, Isaacs 2004, Isaacs 2004, Bro 2004, Bro 2004, Benner 2004, Benner 2004, Ferber 2004, Ferber 2004, Tian 2004, Tian 2004

2003

Voelker 2003, Burgard 2003, Burgard 2003, Smith 2003, Smith 2003, Roca 2003, Roca 2003, Martin 2003, Martin 2003, Martin 2003, Martin 2003, Martin 2003, Martin 2003, Martin 2003, Martin 2003, Mangan 2003, Mangan 2003, Gonzalez 2003, Gonzalez 2003, Gonzalez 2003, Boldogh2003, Kondo-Okamoto 2003, Korenromp 2003, Alon 2003, Atkinson 2003, Blake 2003, Dueber 2003, Wolf 2003, Kaern 2003, Looger 2003, Reed 2003, Forster 2003, Causey 2003, Zimmer 2003, Rosenfeld 2003, Kwon 2003, Rasmussen 2003, Yokobayashi 2003, Rich 2003, Hutter 2003, Geyer 2003, Igarashi 2003, Dien 2003, Schuller 2003, Becker 2003, Tomas 2003, Richard 2003, Lee 2003, Steitz 2003, Bearden 2003, Meeusen 2003, Schloss 2003, Agrawal 2003, Han 2003, Briones 2003, Greenberg 2003, Ghaemmaghami 2003, Nakamura 2003, Ikeda 2003, Kim 2003, de Boer 2003, Causey 2003, Choi 2003, Askenazi 2003, Price 2003, Forster 2003, Schepens 2003, Sanden 2003, Kennedy 2003, Murli 2003, Chappell 2003, Arraiano 2003, Jansen 2003, Howard 2003, Howard 2003, Benner 2003, Benner 2003, Zhou 2003, Zhou 2003, Park 2003, Park 2003, Stojanovic 2003, Stojanovic 2003, Khosla 2003, Khosla 2003, Khosla 2003

2002

Sandmann 2002, Cello 2002, Cello 2002, Cello 2002, Ohnishi 2002, Oh 2002, Underwood 2002, Cirino 2002, Luisi 2002, Elowitz 2002, McMillen 2002, Milo 2002, Ronen 2002, Shen-Orr 2002, Kolisnychenko 2002, Atkinson 2002, Park 2002, Nudler 2002, Smolke 2002, Court 2002, Khlebnikov 2002, Solem 2002, Lee P. 2002, Freer 2002, Hasona 2002, Christensen 2002, Tanaka 2002, Weiss 2002, Shimizu-Sato 2002, Taylor 2002, Benner 2002, Wilds 2002, Hutter 2002, Kilano 2002, Yoshimoto 2002, Aldor 2002, Hasty 2002, Lynd 2002, LaPara 2002, Hogan 2002, Bermudes 2002, Liu 2002, Knight 2002, Declercq 2002, Fukami-Kobayashi 2002, Ghirlanda 2002, Fukui 2002, Lim 2002, Ibarra 2002, Ibarra 2002, Yokobayashi 2002, Yokobayashi 2002

2001

Szostak 2001, Martin 2001, Martin 2001, Edwards 2001, Edwards 2001, Birner 2001, Zhou 2001, Harris 2001, Martinez 2001, Kakinuma 2001, Fuqua 2001, De Kievit 2001, Kleerebezem 2001, Becskei 2001, Miller 2001, Thattai 2001, Lutz 2001, Gambetta 2001, Szostak 2001, Arnold 2001, Venkatraman 2001, Kennan 2001, Saghatelian 2001, Koeller 2001, Kauffman 2001, Lee 2001, Swaminathan 2001, Ellis 2001, Aldor 2001, Covert 2001, Khlebnikov 2001, Khlebnikov 2001, Zaldivar 2001, Zaldivar 2001, Ideker 2001, Nichols 2001, Hernandez-Montalvo 2001, Zhu 2001, Biebl 2001, Tao 2001

2000

Weiss 2000, Gardner 2000, Gardner 2000, Elowitz 2000, Elowitz 2000, Elowitz 2000, Elowitz 2000, Oh 2000, Oh 2000, Schmitz 2000, Rawls 2000, Ruben 2000, Mayo 2000, Prehoda 2000, Petrounia 2000, Wang 2000, Altamirano 2000, Hofvendahl 2000, Altaras 2000, Schmidt-Dannert 2000, Albrecht 2000, Ostergaard 2000, Jin 2000, Aristidou 2000, Beninati 2000, Gardner 2000, Berraud 2000, Woodward 2000, Gill 2000, Khlebnikov 2000, Smolke 2000, Christensen 2000, Merke 2000, Chang 2000, Datsenko 2000, Datsenko 2000, Becskei 2000, Becskei 2000, Farmer 2000, Farmer 2000, Farmer 2000

1999

Hartwell 1999, Nair 1999, Nair 1999, Cho 1999, Ingram 1999, Archleitner 1999, Carrier 1999, Martinez 1999, Zeikus 1999, Desai 1999, Carper 1999, Dewick 1999, Stulke 1999, Martinez 1999, Ma 1999, Stephanopoulos 1999, Davison 1999, Weiss 1999, Davis 1999, Battersby 1999, Wengel 1999, Eschenmoser 1999, Hutchison 1999, Zepik 1999, Hols 1999, Arnold 1999

1998

Marsh 1998, Ingram 1998, Ingram 1998, Stephanopoulos 1998, Stephanopoulos 1998, Davies 1998, McAdams 1998, Jacobsen 1998, Adami 1998, Van Dien 1998, Reddy 1998, Totemeyer 1998, Parajo 1998, Schuber1998, Rizzuto 1998, Chang 1998, Crameri 1998, Zhao 1998, Yomano 1998, Yomano 1998, Jensen 1998, Jensen 1998, Jensen 1998

1997

Gallegos 1997, Gallegos 1997, Carr 1997, Berger 1997, Firshein 1997, Moniruzzaman 1997, Blattner 1997, Posfai 1997, Cheryan 1997, Vander Werf 1997, Walfridsson 1997, Sousa 1997, Pramanik 1997, Van Dien 1997, Lutz 1997, Baron 1997, Freier 1997, Collins 1997, Yeh 1997

1996

Fraenkel 1996, Fraenkel 1996, Walfridsson 1996, Bock 1996, Deanda 1996, Sharfstein 1996, Wanner 1996, Lynd 1996

1995

Trotter 1995, Benthin 1995, Zhang 1995, Metzger 1995, Kuo 1995, Stemmer 1995, Larraide 1995, Dunitz 1995, First 1995, Tabor 1995, Beale 1995

1994

Kim 1994, Mermelstein 1994, Vasconcelos 1994, Keasling 1994, Williams 1994, de Smit 1994, Varma 1994, Haynes 1994, Wolfaardt 1994, Burlage 1994, Latham 1994, Smith 1994, Quinn 1994, Jin 1994

1993

Mermelstein 1993, Mermelstein 1993, Sawyer 1993, Magnuson 1993, Passador 1993, Johnsson 1993, Arnold 1993

1992

Keasling 1992, Keasling 1992, Keasling 1992, Patnaik 1992, Demirci 1992, Rizzuto 1992, Acton 1992, Fay 1992, Kazakov 1992, Sen 1992, Voelker 1992

1991

Bailey1991, Bailey 1991, Bailey 1991, Samuelov 1991, Stephanopoulos 1991, Chen 1991, Kessler 1991, Rose 1991, Vance 1991, Keasling 1991, Rosen 1991, Ohta 1991, Ohta 1991

1990

McConnell 1990, de Lorenzo 1990, Shin 1990, Schneider 1990, Grubb 1990

1989

Nordstrom 1989, Roth 1989, Utsumi 1989

1988

Baga 1988, Benner 1988, Benner 1988

1987

Ingram 1987, Ingram 1987, Holoway 1987, Connell 1987, Benner 1987, Knowles 1987, Ding 1987

1986

Chen 1986, Jones 1986, Gerdes 1986, Tresguerres 1986, Ptashne 1986, Velicelebi 1986

1985

Gay 1985, Hieter 1985, Yen 1985

1984

Hartmanis 1984

1983

George 1983, Bruinenberg 1983, Schmid 1983, Ulmer 1983

1981

Degrado 1981

1980

Scott 1980, Hodom 1980

1979

Mead 1979, Salt 1979

1976

Schmeissner 1976

1972

Das 1972, Breslow 1972

1970

Masterman 1970, Eisen 1970, Pitha 1970

1968

Woodward 1968

1962

Kuhn 1962

1961

Ross 1961, Monod 1961

1960

Sentheshanmuganathan 1960

1952

Orden 1952, Campbell 1952

1951

Pauling 1951

Consolidated author analysis (multi-cited papers by year)

  13 articles, whose nodes contain an image of the abstract, were chosen based on Google Scholar and PubMed search. Each article contains the phrase "synthetic biology" in the title. This node contains all references cited more than once in the 13 chosen articles. These papers form the basis of discovering the most important papers published on this subject that may not contain specific phrases or key words but still contain highly relevant material. Numbers represent how many times that paper has been cited by the 13 chosen papers  

Miller 2009

Picataggio 2009, Yomano 2009

Lee K 2008

Atsumi 2008, Keasling 2008, Yomano 2008, Fortman 2008, Jantama 2008, Mukhopadhyay 2008, Gibson 2008, Conner 2008, Prather 2008

Anderson 2007

Lee K 2007, Tang 2007, Park 2007, Drubin 2007, Withers 2007, Hanai 2007, Sharma 2007, Win 2007, Brenner 2007, Marquet 2007, Serrano 2007, Forster 2007, Alper 2007, Tyo 2007, Stephanopoulos 2007, Lartigue 2007, Kim 2007

Pleiss 2006

Newman 2006, Guido 2006, Luisi 2006, Ro 2006, Lee K 2006, Pfleger 2006, Anderson 2006, Andrianantoandro 2006

Endy 2005

Lee K 2005, Benner 2005, McDaniel 2005, Chan 2005, Alper 2005, Chen 2005, Basu 2005, Clark 2005, Levskaya 2005

Isaacs 2004

Dwyer 2004, Kodumal 2004, Ball 2004, Tian 2004, Ferber 2004, Benner 2004, You 2004, Butler 2004, Kobayashi 2004, Elbeik 2004, Bro 2004

Martin 2003

Khosla 2003, Gonzalez 2003, Burgard 2003, Smith 2003, Roca 2003, Mangan 2003, Howard 2003, Benner 2003, Zhou 2003, Park 2003, Stojanovic 2003

Cello 2002

Ibarra 2002, Yokobayashi 2002

Martin 2001

Edwards 2001, Khlebnikov 2001, Zaldivar 2001

Elowitz 2000

Gardner 2000, Oh 2000, Datsenko 2000, Becskei 2000, Farmer 2000

Nair 1999

Jensen 1998

Ingram 1998, Stephanopoulos 1998, Yomano 1998

Gallegos 1997

Fraenkel 1996

Mermelstein 1993

Keasling 1992

Bailey1991

Ohta 1991

Benner 1988

Ingram 1987

Synthetic Biology Leaders (pictures)

This node offers a face for the works cited most often. Some of these researchers are leaders in the field of synthetic biology and some have taken positions at companies. Nonetheless, the papers cited have contributed to our understanding of synthetic biology. Many pictures are still missing, so if you know these people please add a picture to the correct node.

Martin 2003

Martin 2001

Lee K 2006

Lee K 2005, Lee K 2008, Lee K 2007

Ro 2006

Endy 2005

Keasling 2008

Keasling 1992

Atsumi 2008

Benner 2005

Benner 2003, Benner 2004, Benner 1988

Andrianantoandro 2006

Pfleger 2006

Elowitz 2000

Anderson 2007

Anderson 2006

http://andersonlab.qb3.berkeley.edu/andersonResearch.html

Tang 2007

Drubin 2007

Withers 2007

Park 2007

Park 2003

Bailey1991

Jensen 1998

Farmer 2000

Cello 2002

Khosla 2003

Ball 2004

Gonzalez 2003

Isaacs 2004

McDaniel 2005

Kodumal 2004

Dwyer 2004

Chan 2005

Pleiss 2006

Miller 2009

Yomano 1998

Yomano 2009, Yomano 2008

Picataggio 2009

Fortman 2008

Jantama 2008

Mukhopadhyay 2008

Gibson 2008

Conner 2008

Prather 2008

Hanai 2007

Sharma 2007

Win 2007

Brenner 2007

Marquet 2007

Serrano 2007

Forster 2007

Alper 2007

Alper 2005

Tyo 2007

Lartigue 2007

Kim 2007

Newman 2006

Guido 2006

Luisi 2006

Chen 2005

Basu 2005

Levskaya 2005

You 2004

Butler 2004

Kobayashi 2004

Elbeik 2004

Bro 2004

Ferber 2004

Tian 2004

Burgard 2003

Smith 2003

Roca 2003

Mangan 2003

Howard 2003

Zhou 2003

Stojanovic 2003

Ibarra 2002

Yokobayashi 2002

Edwards 2001

Khlebnikov 2001

Zaldivar 2001

Gardner 2000

Oh 2000

Datsenko 2000

Becskei 2000

Nair 1999

Ingram 1998

Ingram 1987

Stephanopoulos 1998

Stephanopoulos 2007

Gallegos 1997

Fraenkel 1996

Mermelstein 1993

Ohta 1991

Kornmann 2009

Dellomonaco 2010

Jarboe 2010

Ron Weiss

James Collins

Boston University Lab

Internet Links

Institute for Systems Biology

J. Craig Ventor Institute

Synthetic Genomics

Bio-Fiction: Synthetic Biology

Synthetic Biology Organization

ETH Synthetic Biology Workgroup

MIT Videos

SynBERC

BioBuilder

Ars Synthetica

Symplectic Biology

Registry of Biological Parts

Synthetic Biology Info

SynBiology

Synthetic Biology Project

BioBricks Foundation

PearlTrees Collaboration

Leukippos Institute