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Modules por Mind Map: Modules

1. Quality Assurance

1.1. RAW project data quality

1.2. individual results QA

2. Certified

3. Data management

3.1. data transfer

3.2. image management

3.3. GDPR, HIPAA

3.4. automatic data tagging

3.5. data workflow management

3.6. MRI, CT, PET?

3.7. other data formats

4. Network

4.1. Project Management ?

4.1.1. multiple projects

4.1.2. different project types

4.1.3. fine-control of available tools and roles in the project

4.2. activity

4.3. single-site

4.4. multi-site

4.5. share

4.6. IRM ?

5. Support

5.1. Technical Support

5.2. Scientific Support

5.3. Training

5.4. Expert QC

5.5. Radiology reading

6. Tools Engine

6.1. single timepoint analysis

6.2. longitudinal analysis

6.3. analysis workflow management

6.4. group level

7. Central Reading

7.1. web-based viewer

7.2. add ROIs, annotations

8. Statistics

8.1. exploratory views

8.2. longitudinal views

8.3. export to SPSS, etc.

9. Operations

9.1. DevOps

9.2. Compliance

9.3. platform v2.0

10. trial recruitment going, how can I accelerate?

10.1. patient triage for trials

10.2. data-drive patient clusters

11. DL engine MVP

11.1. use DL networks as tools

11.2. GPU VMs for training

11.3. GPU VMs for running

11.4. Open-data

12. Open-data

12.1. datasets

12.2. Open data store

13. Developer

13.1. SDK

13.2. developer workflows (versions, devops, ...)

13.3. CLI

14. Data Transfer Integrations

14.1. PACS IN

14.2. v2.0 PACS OUT

14.3. QMENTA app

14.4. python API

15. Brain Tools Store

15.1. App store

15.2. QMENTA tools

15.2.1. TST

15.2.1.1. TST w/ masks

15.2.2. tumor segmentation

15.2.3. psychiatry comparative

15.2.4. gadolinium tool

15.2.5. longitudinal MS tool

15.3. community tools

15.4. partners tools

16. Future Suites

16.1. Q Cloud Platform v2.0

16.1.1. Data management v2.0

16.1.2. data store

16.2. Q Cloud Platform v3.0

16.2.1. Developer v2.0

16.3. DL Suite

16.3.1. clinical viewer for expert input

16.3.2. DL Engine v2.0

16.4. Neurological Suite v2.0

16.4.1. Brain Tools Store

16.4.2. PACS in/out

16.4.3. central reading / basic viewer

16.4.4. MRI, PET, CT, ...

16.5. PIs network

16.5.1. big pharma is interested to know/get contacts with PIs working in disease fields

16.6. Improve Trial Recruitment

16.6.1. Insights

16.6.2. optimization

16.6.3. speed

16.7. Clinical Trial Suite v2.0

16.7.1. Real-time trial status reports

16.7.2. eCRF

16.7.3. EDC

16.7.4. comparative scoring

16.7.5. Central Reading v2.0

16.8. Post-trial tracking

16.8.1. follow imaging in Phase IV

16.9. Neurological Indications

16.9.1. MS

16.9.1.1. MS remyelination

16.9.1.2. lesion segmentation

16.9.1.3. TST

16.9.1.4. 510(k)

16.9.2. Oncology / tumors

16.9.2.1. tumor segmentation (glioma)

16.9.2.2. TST for neurosurgery

16.9.2.3. KOL

16.9.2.4. 510(k)

16.9.3. Neurosurgery

16.9.3.1. tumor segmentation

16.9.3.2. TST

16.9.3.3. v2.0 ROIs defined by user

16.9.3.4. KOL

16.9.3.5. 510(k)

16.9.4. Psychiatry

16.9.4.1. rsfmri

16.9.4.2. normative DB

16.9.4.3. KOL

16.9.4.4. 510(k)

16.9.5. TBI/mild trauma

16.9.5.1. TST

16.9.5.2. normative DB

16.9.5.3. KOL

16.9.5.4. 510(k)

16.10. People's Brains

16.10.1. data management / minimalist view

16.10.2. separate databases imaging / metadata

16.10.3. comparative scoring

16.11. Disease prediction

16.11.1. DL Engine

16.11.2. Normative and disease databases

17. Suites

17.1. Q Cloud Platform v1.0

17.1.1. data management

17.1.2. Tools Engine

17.1.3. Tools Store

17.1.4. SDK

17.1.5. Network

17.1.6. Quality Check

17.1.7. central reading / basic viewer

17.2. Clinical Trial Suite

17.2.1. central reading

17.2.2. Certified

17.2.3. Brain Tools Store

17.2.4. QCP

17.2.4.1. workflow management

17.3. MR safety Suite

17.3.1. Gadolinium tool

17.3.1.1. validated

17.3.1.2. needs 510(k) ?

17.3.1.3. KOL: bayer

17.3.2. longitudinal view

17.3.3. QCP

17.3.3.1. data management

17.3.3.2. network

17.3.3.3. Tools engine

17.4. Neurological Suite

17.4.1. data transfer integrations

17.4.2. Brain Tools Store

17.4.3. MRI, PET, CT, ...

17.4.4. QCP

17.5. Post-trial longitudinal studies

17.5.1. Brain Tools store

17.5.2. on-premise storage / star project ?

17.5.3. group statistics ?

17.5.4. QCP

17.5.4.1. quality check

17.5.4.2. data management

17.5.4.3. network

17.6. Medical Suite

17.6.1. compute engine

17.6.1.1. ? quality check

17.6.1.2. data management

17.6.2. Brain Tools Store: +3rd party FDA tools

17.6.3. Data Transfer Integrations

17.6.4. Certified

17.6.5. ? central reading v2.0

17.6.6. Neurological Indications

17.6.6.1. MS

17.6.6.1.1. remyelination MS tool

17.6.6.1.2. lesion segmentation

17.6.6.1.3. TST

17.6.6.2. Oncology / tumors

17.6.6.2.1. tumor segmentation (glioma)

17.6.6.2.2. TST for neurosurgery

17.6.6.3. Neurosurgery

17.6.6.3.1. tumor segmentation

17.6.6.3.2. TST

17.6.6.3.3. v2.0 ROIs defined by user

17.6.6.4. Psychatry

17.6.6.4.1. rsfmri

17.6.6.4.2. normative DB

17.6.6.5. TBI/mild trauma

17.6.6.5.1. TST

17.6.6.5.2. normative DB

17.6.6.6. Others

17.6.6.6.1. app store

18. Future Modules

18.1. Data Management v2.0

18.1.1. search/query on data tags, dicom headers, ...

18.1.2. pass-through costs

18.1.3. local resources

18.1.3.1. data storage on-premise

18.1.3.2. compute on-premise

18.1.4. user defined dataformats, and processors

18.2. Network v2.0

18.2.1. Role based definition

18.2.2. Role based access

18.2.3. IRM+

18.3. Quality Check v2.0

18.3.1. study dataset QA

18.3.1.1. definition of study protocol

18.3.1.2. highlight outliers, etc.

18.3.2. analysis completeness

18.3.2.1. define and see progress on analysis running, completed, missing, ..

18.3.3. study-level results QA

18.3.3.1. to have an idea of 'outliers'

18.3.4. study-level raw data SNR

18.3.4.1. violin plots, etc showing SNRs, ...

18.4. Data Transfer Integrations v2.0

18.4.1. upload/download connector (box, gdrive, ..)

18.5. Brain Tools Store +

18.5.1. C-PAC

18.5.2. HCP

18.5.3. ASL

18.5.4. pyradiomics

18.5.5. BIDS tools

18.6. Developer v2.0

18.6.1. customizable workflows for 'developer' users

18.6.1.1. visual workflows, CWL, rabbix composer

18.7. DL Engine v2.0

18.7.1. DL distributed across sites

18.8. DL Engine v3.0

18.8.1. Q framework - tensorflow + ..

18.8.2. QC

18.8.3. training

18.8.4. distributing tool

18.9. Central Reading v2.0

18.9.1. clinical viewer 510(k)

18.10. Comparative Scoring

18.10.1. normative DB

18.10.2. lots of Data

18.11. Normative DBs

18.11.1. data harmonization

18.11.1.1. volumetrics

18.11.1.2. diffusion

18.11.2. easier definition of normative DBs by user

18.12. Statistics v2.0

18.12.1. aggregated results and export

18.12.2. groups t-tests, etc.

18.12.3. data-driven groups, for exploration

18.13. RWE

18.13.1. data

19. FE v2.0