CONDOR CLUSTER EC2 HOST

1. bowtiedata

1.1. pwbowtie

1.1.1. dataset_test

1.1.1.1. one

1.1.1.1.1. pwcontrol

1.1.1.1.2. samplenames

1.1.1.2. shared

1.1.1.3. SAMPLE_1.gz

1.1.1.4. SAMPLE_2.gz

1.1.1.5. SAMPLE_3.gz

1.1.1.6. SAMPLE_3.gz

2. SOAR

2.1. control

2.1.1. control

2.1.1.1. ./control --project=pwbowtie --version=v44cycle --datasets=dataset_test

2.1.2. fsconfing

2.1.2.1. SOAR,/shared/home/big.science/SOAR RUNURL,/shared/home/big.science/SOAR RESULTURL,/shared/home/big.science/SOAR HTMLURL,/shared/home/big.science/SOAR CONTROL,/shared/home/big.science/SOAR/control SOURCE,/shared/home/big.science/SOAR/sources RESULTS,/shared/home/big.science/SOAR/results TARCACHELOC,/shared/home/big.science/SOAR/tarcache CONDORRUNS,/shared/home/big.science/SOAR/condorruns HTMLLOC,/shared/home/big.science/SOAR TRACKING,/shared/home/big.science/SOAR/tracking IMAGERUNS,/shared/home/big.science/SOAR/imageruns pwbowtie,/shared/home/big.science/bowtiedata

2.1.3. other

2.2. sources

2.2.1. pwbowtie

2.2.1.1. v44cycle

2.2.1.1.1. code

2.2.1.1.2. jobs

2.3. condorruns

2.3.1. pwbowtie

2.3.1.1. 1

2.3.1.1.1. dataset_test-one

2.3.1.2. 2

3. Participants

3.1. Victor (MIR)

3.2. Bill (Condor Team)

3.3. Ian (Cycle Computing)

4. Goals

4.1. Add a prefetch parameter to the innerwrapper

4.2. Add a --put parameter to the innerwrappper

4.3. Test the dag without file transfer

5. Action Items

5.1. Action Item 1

5.2. Action Item 2

6. Notes

7. CLICK HERE TO SEE THE DAG AS AN IMAGE