WES (raw data)

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WES (raw data) by Mind Map: WES (raw data)

1. Gene expression table

1.1. TP53 signature

1.2. Proliferation signature

1.3. Cytokin/immune signature

1.4. PDL1 exp

1.5. EMT (UP) signature

1.6. EMT(DOWN) signature

1.7. MSI associated signature

2. Somatic mutation list -Razvan은 SNP만 -TCGA는 SNP, indel

2.1. Razvan somatic mutation filter

2.1.1. Mutational signature

2.1.2. Mutation load

2.1.3. EBV prediction

2.1.4. MSI prediction

2.1.5. Gender prediction

3. CNV list

4. Neoantigen list

4.1. Neoantigen load

5. RNA-seq (raw data)